STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL69174.1Beta-1,3-glucanase; PFAM: Fibronectin type III domain; Glycosyl hydrolase family 81; Fibronectin type III domain. (1067 aa)    
Predicted Functional Partners:
ACL70610.1
YD repeat protein; PFAM: RHS Repeat; RHS Repeat; RHS Repeat; RHS Repeat; RHS Repeat; RHS Repeat; RHS Repeat; RHS Repeat; RHS Repeat; RHS Repeat; Putative peptidoglycan binding domain; RHS Repeat; TIGRFAM: YD repeat (two copies).
 
    0.523
ACL70137.1
Hypothetical protein.
  
     0.451
ACL69176.1
beta-N-acetylhexosaminidase; PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain; Belongs to the glycosyl hydrolase 3 family.
 
     0.431
ACL70664.1
PFAM: Acetyltransferase (GNAT) family.
   
    0.418
ACL69028.1
PFAM: Glycosyl hydrolases family 16; Fibronectin type III domain; Carbohydrate binding module (family 6).
   
 0.416
ACL69185.1
PFAM: Bacterial extracellular solute-binding protein.
  
     0.400
Your Current Organism:
Halothermothrix orenii
NCBI taxonomy Id: 373903
Other names: H. orenii H 168, Halothermothrix orenii H 168, Halothermothrix orenii str. H 168, Halothermothrix orenii strain H 168
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.