STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL69935.1PFAM: Nucleoside recognition. (194 aa)    
Predicted Functional Partners:
ACL69934.1
PFAM: Nucleoside recognition.
  
 0.999
ACL69377.1
TIGRFAM: stage III sporulation protein AD.
  
  
 0.612
ACL69374.1
TIGRFAM: stage III sporulation protein AA.
  
  
 0.554
ACL69811.1
TIGRFAM: stage IV sporulation protein A.
  
   
 0.529
ACL69375.1
TIGRFAM: stage III sporulation protein AB.
   
  
 0.516
ACL69936.1
PFAM: Stage V sporulation protein S (SpoVS).
     
 0.516
ACL69443.1
PFAM: Integral membrane protein DUF95; TIGRFAM: stage II sporulation protein M.
   
  
 0.489
ACL69933.1
PFAM: PHP domain.
       0.489
ACL69479.1
Serine-type D-Ala-D-Ala carboxypeptidase; PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain; Belongs to the peptidase S11 family.
  
  
 0.460
ACL69376.1
PFAM: Stage III sporulation protein AC (SpoIIIAC); TIGRFAM: stage III sporulation protein AC.
   
  
 0.453
Your Current Organism:
Halothermothrix orenii
NCBI taxonomy Id: 373903
Other names: H. orenii H 168, Halothermothrix orenii H 168, Halothermothrix orenii str. H 168, Halothermothrix orenii strain H 168
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.