STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL70061.1Beta-mannosidase; PFAM: Glycosyl hydrolases family 2, immunoglobulin-like beta-sandwich domain; Glycosyl hydrolases family 2, sugar binding domain; Belongs to the glycosyl hydrolase 2 family. (837 aa)    
Predicted Functional Partners:
ACL70306.1
PFAM: Glycosyl hydrolases family 2, immunoglobulin-like beta-sandwich domain; Glycosyl hydrolases family 2, sugar binding domain; Glycosyl hydrolases family 2, TIM barrel domain; Belongs to the glycosyl hydrolase 2 family.
  
  
 
0.929
ACL70060.1
L-threonine 3-dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
    0.716
ACL70064.1
PFAM: Bacterial extracellular solute-binding protein.
 
     0.636
ACL70062.1
PFAM: Binding-protein-dependent transport system inner membrane component.
       0.623
ACL70803.1
PFAM: Glycosyl hydrolases family 43; Glycosyl hydrolases family 32 N terminal; Belongs to the glycosyl hydrolase 43 family.
 
     0.600
ACL70063.1
PFAM: Binding-protein-dependent transport system inner membrane component.
  
    0.597
ACL71017.1
PFAM: Phosphomethylpyrimidine kinase; pfkB family carbohydrate kinase; TIGRFAM: tagatose-6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
   
    0.576
ACL70668.1
3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: NAD dependent epimerase/dehydratase family; short chain dehydrogenase.
 
  
 0.547
ACL69716.1
Rhamnulokinase; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: rhamnulokinase.
 
  
 0.530
ACL70191.1
Alpha-mannosidase; PFAM: Alpha mannosidase, middle domain; Glycosyl hydrolase family 57; Glycosyl hydrolases family 38 C-terminal domain; Glycosyl hydrolases family 38 N-terminal domain.
  
   
 0.491
Your Current Organism:
Halothermothrix orenii
NCBI taxonomy Id: 373903
Other names: H. orenii H 168, Halothermothrix orenii H 168, Halothermothrix orenii str. H 168, Halothermothrix orenii strain H 168
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.