STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL70068.1PFAM: Binding-protein-dependent transport system inner membrane component. (284 aa)    
Predicted Functional Partners:
ACL70070.1
PFAM: Bacterial extracellular solute-binding protein.
 
  0.993
ACL70069.1
PFAM: Binding-protein-dependent transport system inner membrane component.
  0.992
ACL70203.1
PFAM: Binding-protein-dependent transport system inner membrane component.
  0.971
ACL70204.1
PFAM: Bacterial extracellular solute-binding protein.
 
  0.971
ACL70062.1
PFAM: Binding-protein-dependent transport system inner membrane component.
  
  
 
0.909
ACL70202.1
PFAM: Binding-protein-dependent transport system inner membrane component.
  
  
 
0.901
ACL68806.1
ABC transporter related; PFAM: TOBE domain; TOBE domain; ABC transporter.
  
 0.898
ACL69093.1
PFAM: ABC transporter; TOBE domain.
  
 0.898
ACL69094.1
PFAM: TOBE domain; ABC transporter; TOBE domain.
  
 0.898
ACL70797.1
PFAM: Bacterial extracellular solute-binding protein.
  
   0.778
Your Current Organism:
Halothermothrix orenii
NCBI taxonomy Id: 373903
Other names: H. orenii H 168, Halothermothrix orenii H 168, Halothermothrix orenii str. H 168, Halothermothrix orenii strain H 168
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.