STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL70241.1Sporulation protease LonB; PFAM: Lon protease (S16) C-terminal proteolytic domain; ATPase family associated with various cellular activities (AAA); Magnesium chelatase, subunit ChlI; TIGRFAM: lon-related putative ATP-dependent protease; ATP-dependent protease LonB. (558 aa)    
Predicted Functional Partners:
ACL69375.1
TIGRFAM: stage III sporulation protein AB.
  
    0.789
ACL69379.1
TIGRFAM: stage III sporulation protein AF.
  
     0.687
ACL69378.1
TIGRFAM: stage III sporulation protein AE.
  
    0.654
ACL69443.1
PFAM: Integral membrane protein DUF95; TIGRFAM: stage II sporulation protein M.
  
    0.626
clpX
ATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.
 
  
 0.622
ACL70037.1
Hypothetical protein.
  
     0.571
ACL71090.1
Uncharacterized conserved membrane protein.
  
     0.567
ACL69377.1
TIGRFAM: stage III sporulation protein AD.
  
    0.564
lon
ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.
 
  
0.563
ACL69380.1
TIGRFAM: stage III sporulation protein AG.
  
     0.561
Your Current Organism:
Halothermothrix orenii
NCBI taxonomy Id: 373903
Other names: H. orenii H 168, Halothermothrix orenii H 168, Halothermothrix orenii str. H 168, Halothermothrix orenii strain H 168
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.