STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL70263.1PFAM: RAMP superfamily; TIGRFAM: CRISPR-associated RAMP protein, Cmr4 family. (325 aa)    
Predicted Functional Partners:
ACL70265.1
TIGRFAM: CRISPR-associated protein, Crm2 family.
 
 
 
 0.994
ACL70262.1
TIGRFAM: CRISPR-associated protein, Cmr5 family.
 
 
 
 0.993
ACL70261.1
PFAM: RAMP superfamily; S1 RNA binding domain; TIGRFAM: CRISPR-associated RAMP protein, Cmr6 family.
 
 
 
 0.992
ACL70266.1
PFAM: RAMP superfamily; TIGRFAM: CRISPR-associated RAMP protein, Cmr1 family.
 
 
 
 0.979
ACL70264.1
TIGRFAM: CRISPR-associated protein, Cmr3 family.
 
   
 0.965
ACL70260.1
TIGRFAM: putative CRISPR-associated protein, APE2256 family.
 
     0.930
ACL70259.1
TIGRFAM: CRISPR-associated protein, TM1812 family; CRISPR-associated protein DxTHG motif.
 
   
 0.876
ACL70258.1
Hypothetical protein.
 
     0.667
ACL70271.1
CRISPR-associated helicase Cas3; PFAM: Helicase conserved C-terminal domain; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated HD domain protein.
 
     0.591
ACL70257.1
Thioredoxin domain protein; PFAM: Thioredoxin; Glutaredoxin.
       0.561
Your Current Organism:
Halothermothrix orenii
NCBI taxonomy Id: 373903
Other names: H. orenii H 168, Halothermothrix orenii H 168, Halothermothrix orenii str. H 168, Halothermothrix orenii strain H 168
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.