STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL70340.1Hypothetical protein. (263 aa)    
Predicted Functional Partners:
ACL70339.1
PFAM: PHP domain; TIGRFAM: histidinol phosphate phosphatase HisJ family.
       0.773
ACL70341.1
PFAM: Squalene/phytoene synthase; TIGRFAM: farnesyl-diphosphate farnesyltransferase.
       0.554
ACL70338.1
Conserved protein of unknown function BmrU; PFAM: Diacylglycerol kinase catalytic domain (presumed); TIGRFAM: conserved protein of unknown function cotranscribed with Bmr (bmrU).
       0.551
ACL70342.1
Metal dependent phosphohydrolase; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG.
       0.530
ACL70343.1
Extracellular ligand-binding receptor; PFAM: Receptor family ligand binding region.
       0.530
Your Current Organism:
Halothermothrix orenii
NCBI taxonomy Id: 373903
Other names: H. orenii H 168, Halothermothrix orenii H 168, Halothermothrix orenii str. H 168, Halothermothrix orenii strain H 168
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.