STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL70397.1Amidophosphoribosyltransferase; TIGRFAM: comF family protein. (243 aa)    
Predicted Functional Partners:
ACL69509.1
PFAM: SMF family; TIGRFAM: DNA protecting protein DprA.
 
 
 0.894
ACL70042.1
PFAM: Metallo-beta-lactamase superfamily; Competence protein; TIGRFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2.
 
  
 0.856
ACL70660.1
Hypothetical protein.
  
  
 0.838
ACL70398.1
RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-H factor.
  
    0.791
ACL69498.1
Mg chelatase, subunit ChlI; PFAM: ATPase family associated with various cellular activities (AAA); Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein.
 
  
 0.751
ACL71038.1
N-acetylglucosamine-6-phosphate deacetylase; PFAM: Amidohydrolase family; Amidohydrolase family; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase.
  
    0.678
ACL70440.1
Flagellar basal-body rod protein FlgC; PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
   
   0.660
ACL69792.1
PFAM: Prephenate dehydrogenase.
   
  
 0.655
ACL70174.1
PFAM: RadC, DNA repair protein; TIGRFAM: DNA repair protein radc; Belongs to the UPF0758 family.
 
    0.651
ACL70434.1
Uncharacterized conserved protein.
  
    0.645
Your Current Organism:
Halothermothrix orenii
NCBI taxonomy Id: 373903
Other names: H. orenii H 168, Halothermothrix orenii H 168, Halothermothrix orenii str. H 168, Halothermothrix orenii strain H 168
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.