STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL70414.1Hypothetical protein. (119 aa)    
Predicted Functional Partners:
ACL70415.1
Type IV pilus assembly PilZ; PFAM: PilZ domain.
       0.773
ACL70416.1
Cobyrinic acid ac-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
       0.757
ACL70417.1
GTP-binding signal recognition particle SRP54 G- domain protein; PFAM: SRP54-type protein, GTPase domain.
       0.757
flhA
Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
       0.757
ACL70413.1
RNA polymerase, sigma 28 subunit, FliA/WhiG; PFAM: Sigma-70 region 2; Sigma-70, region 4; Sigma-70, region 4; Sigma-70 region 3; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor, FliA/WhiG family.
       0.741
ACL70412.1
Predicted polymerase, contains PALM domain, HD hydrolase domain and Zn-ribbon domain; PFAM: Protein of unknown function (DUF342).
       0.681
ACL70411.1
Hypothetical protein.
       0.662
ACL70409.1
PFAM: Aminodeoxychorismate lyase.
       0.636
ACL70410.1
Hypothetical protein.
       0.636
flhB
Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.
       0.522
Your Current Organism:
Halothermothrix orenii
NCBI taxonomy Id: 373903
Other names: H. orenii H 168, Halothermothrix orenii H 168, Halothermothrix orenii str. H 168, Halothermothrix orenii strain H 168
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.