STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL70417.1GTP-binding signal recognition particle SRP54 G- domain protein; PFAM: SRP54-type protein, GTPase domain. (356 aa)    
Predicted Functional Partners:
ACL70416.1
Cobyrinic acid ac-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
 
 0.999
ACL70424.1
CheC, inhibitor of MCP methylation; PFAM: Surface presentation of antigens (SPOA) protein; CheC-like family; CheC-like family; TIGRFAM: flagellar motor switch protein FliN.
 
 
 0.995
flhA
Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
  
  
 0.991
ACL70425.1
PFAM: Flagellar motor switch protein FliM; Surface presentation of antigens (SPOA) protein; TIGRFAM: flagellar motor switch protein FliM.
 
 
 0.975
flhB
Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.
  
  
 0.946
ACL70423.1
Flagellar biogenesis protein.
  
  
 0.932
ACL70415.1
Type IV pilus assembly PilZ; PFAM: PilZ domain.
 
  
 0.930
fliE
PFAM: Flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex protein (FliE).
 
  
 0.924
ACL70428.1
PFAM: MotA/TolQ/ExbB proton channel family.
 
  
 0.908
ACL70437.1
Flagellar biosynthesis/type III secretory pathway protein; PFAM: Flagellar assembly protein FliH.
 
  
 0.903
Your Current Organism:
Halothermothrix orenii
NCBI taxonomy Id: 373903
Other names: H. orenii H 168, Halothermothrix orenii H 168, Halothermothrix orenii str. H 168, Halothermothrix orenii strain H 168
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.