STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL70575.1Glycoside hydrolase family 13 domain protein; PFAM: Isoamylase N-terminal domain. (900 aa)    
Predicted Functional Partners:
secA
Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.
  
 
 
 0.867
ACL70574.1
Hypothetical protein.
       0.561
ACL70368.1
PFAM: Bacterial extracellular solute-binding protein.
  
  
 0.541
ACL70792.1
PFAM: Bacterial extracellular solute-binding protein.
  
  
 0.541
ACL70573.1
PFAM: Alpha amylase, catalytic domain.
  
  
 0.413
ACL69580.1
WD40 domain protein beta Propeller; PFAM: Dipeptidyl peptidase IV (DPP IV) N-terminal region; WD40-like Beta Propeller Repeat.
    
 
 0.406
ACL68806.1
ABC transporter related; PFAM: TOBE domain; TOBE domain; ABC transporter.
  
  
 0.405
ACL69093.1
PFAM: ABC transporter; TOBE domain.
  
  
 0.405
ACL69094.1
PFAM: TOBE domain; ABC transporter; TOBE domain.
  
  
 0.405
Your Current Organism:
Halothermothrix orenii
NCBI taxonomy Id: 373903
Other names: H. orenii H 168, Halothermothrix orenii H 168, Halothermothrix orenii str. H 168, Halothermothrix orenii strain H 168
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.