STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL70614.1PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain. (190 aa)    
Predicted Functional Partners:
ACL70618.1
PFAM: Bacterial type II secretion system protein F domain; Bacterial type II secretion system protein F domain.
  
  
 0.898
ACL70621.1
Type II secretory pathway component PulK.
  
 
 0.882
ACL70619.1
PFAM: GSPII_E N-terminal domain; Type II/IV secretion system protein; TIGRFAM: general secretory pathway protein E.
  
 
 0.866
ACL70616.1
TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
  
  
 0.797
ACL70615.1
PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
       0.773
ACL70617.1
Type II secretion system protein G; PFAM: Prokaryotic N-terminal methylation motif; Bacterial type II secretion system protein G; TIGRFAM: general secretion pathway protein G; prepilin-type N-terminal cleavage/methylation domain.
       0.773
ACL70613.1
PFAM: Fimbrial assembly protein (PilN).
  
  
 0.719
ACL70611.1
PFAM: Bacterial type II and III secretion system protein; Secretin and TonB N terminus short domain; Bacterial type II/III secretion system short domain.
  
  
 0.715
ACL70612.1
Hypothetical protein.
       0.689
ACL69357.1
Tfp pilus assembly protein, major pilin PilA; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
  
  
 0.639
Your Current Organism:
Halothermothrix orenii
NCBI taxonomy Id: 373903
Other names: H. orenii H 168, Halothermothrix orenii H 168, Halothermothrix orenii str. H 168, Halothermothrix orenii strain H 168
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.