STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL70643.1Uncharacterized protein conserved in bacteria; PFAM: Domain of unknown function (DUF374). (222 aa)    
Predicted Functional Partners:
ACL70638.1
PFAM: Bacterial lipid A biosynthesis acyltransferase.
 
  
  0.973
lpxK
Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).
 
     0.893
ACL70637.1
Three-deoxy-D-manno-octulosonic-acid transferase domain protein; PFAM: Glycosyltransferase family 9 (heptosyltransferase); 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); TIGRFAM: lipopolysaccharide heptosyltransferase I; lipopolysaccharide heptosyltransferase II.
     0.878
ACL70636.1
PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase II; lipopolysaccharide heptosyltransferase III, putative.
     0.790
ACL70644.1
PFAM: ABC transporter transmembrane region; ABC transporter.
       0.780
ACL70639.1
KpsF/GutQ family protein; PFAM: CBS domain pair; SIS domain; TIGRFAM: KpsF/GutQ family protein; Belongs to the SIS family. GutQ/KpsF subfamily.
 
     0.729
kdsB
3-deoxy-D-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.
 
     0.722
kdsA
2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I family; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase; Belongs to the KdsA family.
 
     0.686
ACL70503.1
Uncharacterized protein conserved in bacteria; PFAM: Protein of unknown function (DUF1009).
 
     0.681
ACL70635.1
PFAM: Glycosyl transferase family 2.
 
     0.570
Your Current Organism:
Halothermothrix orenii
NCBI taxonomy Id: 373903
Other names: H. orenii H 168, Halothermothrix orenii H 168, Halothermothrix orenii str. H 168, Halothermothrix orenii strain H 168
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.