STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL70663.1Radical SAM domain protein; PFAM: Biotin and Thiamin Synthesis associated domain; Radical SAM superfamily. (350 aa)    
Predicted Functional Partners:
birA
Biotin (acetyl-CoA carboxylase) synthetase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
 
 0.970
ACL70678.1
Small GTP-binding protein; PFAM: GTPase of unknown function; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein Era; GTP-binding conserved hypothetical protein; small GTP-binding protein domain.
   
 0.964
ACL70680.1
Hypothetical protein.
 
  
 0.841
ACL69059.1
PFAM: Iron only hydrogenase large subunit, C-terminal domain; 4Fe-4S binding domain; 2Fe-2S iron-sulfur cluster binding domain; Iron hydrogenase small subunit; TIGRFAM: hydrogenases, Fe-only.
 
  
 0.834
ACL69390.1
NADH dehydrogenase (ubiquinone) 75 kDa subunit; PFAM: Iron hydrogenase small subunit; 4Fe-4S binding domain; 4Fe-4S binding domain; 2Fe-2S iron-sulfur cluster binding domain; Iron only hydrogenase large subunit, C-terminal domain; TIGRFAM: hydrogenases, Fe-only.
 
  
 0.834
ACL70665.1
HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED.
       0.775
ACL70662.1
PFAM: Alanine racemase, N-terminal domain.
       0.773
ACL70664.1
PFAM: Acetyltransferase (GNAT) family.
       0.773
ACL68943.1
PFAM: Iron only hydrogenase large subunit, C-terminal domain; 4Fe-4S binding domain; 2Fe-2S iron-sulfur cluster binding domain; Iron hydrogenase small subunit; TIGRFAM: hydrogenases, Fe-only.
 
  
 0.741
ACL70679.1
PFAM: Biotin and Thiamin Synthesis associated domain; Radical SAM superfamily; TIGRFAM: thiazole biosynthesis protein ThiH.
 
  
0.671
Your Current Organism:
Halothermothrix orenii
NCBI taxonomy Id: 373903
Other names: H. orenii H 168, Halothermothrix orenii H 168, Halothermothrix orenii str. H 168, Halothermothrix orenii strain H 168
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