STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL70766.1PFAM: Type I restriction modification DNA specificity domain; Type I restriction modification DNA specificity domain. (565 aa)    
Predicted Functional Partners:
ACL70767.1
PFAM: N-6 DNA Methylase.
 
 0.998
ACL69202.1
PFAM: N-6 DNA Methylase; TIGRFAM: type I restriction system adenine methylase (hsdM).
 
 0.988
ACL70768.1
PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); EcoEI R protein C-terminal; Type III restriction enzyme, res subunit; TIGRFAM: putative glutamate--cysteine ligase/putative amino acid ligase.
 
 
 0.985
ACL69204.1
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.849
ACL68789.1
Hypothetical protein.
 
    0.638
ACL70764.1
Plasmid maintenance system antidote protein, XRE family; PFAM: Helix-turn-helix; TIGRFAM: addiction module antidote protein, HigA family.
       0.529
ACL70765.1
PFAM: Plasmid maintenance system killer protein.
       0.528
ACL69203.1
PFAM: Type I restriction modification DNA specificity domain; Type I restriction modification DNA specificity domain.
 
   
0.524
ACL70763.1
PFAM: Putative sugar-specific permease, SgaT/UlaA.
       0.508
atpF
ATP synthase F0, B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
    
 
 0.471
Your Current Organism:
Halothermothrix orenii
NCBI taxonomy Id: 373903
Other names: H. orenii H 168, Halothermothrix orenii H 168, Halothermothrix orenii str. H 168, Halothermothrix orenii strain H 168
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.