STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL70882.1PFAM: Endonuclease/Exonuclease/phosphatase family. (281 aa)    
Predicted Functional Partners:
ACL70748.1
Cysteine desulfurase; PFAM: Aminotransferase class-V.
    
   0.843
ACL69420.1
Hypothetical protein.
  
     0.596
ACL69439.1
Hypothetical protein.
  
     0.561
ACL69417.1
PFAM: Thiamin pyrophosphokinase, catalytic domain.
  
     0.545
ACL69334.1
Hypothetical protein.
 
     0.536
ACL70883.1
ErfK/YbiS/YcfS/YnhG family protein; PFAM: ErfK/YbiS/YcfS/YnhG; LysM domain.
 
  
 0.532
ispE
4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.
       0.511
ACL70803.1
PFAM: Glycosyl hydrolases family 43; Glycosyl hydrolases family 32 N terminal; Belongs to the glycosyl hydrolase 43 family.
  
     0.465
ACL69419.1
PFAM: Glycosyl transferase family 2.
  
   
 0.403
Your Current Organism:
Halothermothrix orenii
NCBI taxonomy Id: 373903
Other names: H. orenii H 168, Halothermothrix orenii H 168, Halothermothrix orenii str. H 168, Halothermothrix orenii strain H 168
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.