STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL70912.1PFAM: Glycosyl transferases group 1. (324 aa)    
Predicted Functional Partners:
ACL70913.1
PFAM: Glycosyl hydrolases family 18.
  
    0.774
ACL70914.1
Hypothetical protein.
       0.757
ACL70683.1
Hypothetical protein.
 
     0.693
ACL69002.1
PFAM: Alpha amylase, catalytic domain.
   
 0.557
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.557
ACL70915.1
Uncharacterized protein conserved in bacteria; PFAM: Protein of unknown function (DUF1021).
       0.489
ACL70347.1
PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; Nucleotidyl transferase.
  
 
 0.465
ACL70911.1
Na/Pi-cotransporter II-related protein; PFAM: PhoU family; Na+/Pi-cotransporter; TIGRFAM: Na/Pi-cotransporter.
       0.461
ACL71022.1
PFAM: UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain.
 
  
 0.452
Your Current Organism:
Halothermothrix orenii
NCBI taxonomy Id: 373903
Other names: H. orenii H 168, Halothermothrix orenii H 168, Halothermothrix orenii str. H 168, Halothermothrix orenii strain H 168
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.