STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL70993.1PFAM: Histone deacetylase domain. (480 aa)    
Predicted Functional Partners:
ACL69913.1
AAA ATPase central domain protein; PFAM: ATPase family associated with various cellular activities (AAA); TIGRFAM: stage V sporulation protein K.
   
 0.899
ACL70466.1
Flagellar protein.
    
 0.897
ACL69641.1
Helicase domain protein; PFAM: Type III restriction enzyme, res subunit; Helicase conserved C-terminal domain; SNF2 family N-terminal domain.
   
 0.870
ACL70990.1
N-methylhydantoinase (ATP-hydrolyzing); PFAM: Hydantoinase/oxoprolinase; Hydantoinase/oxoprolinase N-terminal region.
 
   0.859
ACL70245.1
PFAM: Ankyrin repeat; Ankyrin repeat; Ankyrin repeat; Ankyrin repeat; Ankyrin repeat; Ankyrin repeat; Ankyrin repeat; Ankyrin repeat; Ankyrin repeat; Ankyrin repeat.
   
 0.644
ACL69831.1
PFAM: Phosphoribulokinase / Uridine kinase family.
   
 0.623
smc
Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.
   
 0.582
ACL70394.1
Glutamate synthase (NADPH) GltB2 subunit; PFAM: Conserved region in glutamate synthase.
  
     0.582
mutS
DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.
   
 
 0.575
ACL70992.1
Hypothetical protein.
       0.550
Your Current Organism:
Halothermothrix orenii
NCBI taxonomy Id: 373903
Other names: H. orenii H 168, Halothermothrix orenii H 168, Halothermothrix orenii str. H 168, Halothermothrix orenii strain H 168
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.