STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL71020.1PFAM: MarR family; ROK family; TIGRFAM: ROK family protein (putative glucokinase). (396 aa)    
Predicted Functional Partners:
ACL70443.1
PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase.
 
   
 0.915
ACL71019.1
PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: class II aldolase, tagatose bisphosphate family; ketose-bisphosphate aldolases.
     
 0.693
ACL68972.1
PFAM: Iron-containing alcohol dehydrogenase; Aldehyde dehydrogenase family; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.594
metN
ABC transporter related; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
   
   0.583
ACL69243.1
PFAM: Heavy-metal-associated domain; E1-E2 ATPase; haloacid dehalogenase-like hydrolase; Heavy-metal-associated domain; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; copper-(or silver)-translocating P-type ATPase.
     
 0.580
ACL71017.1
PFAM: Phosphomethylpyrimidine kinase; pfkB family carbohydrate kinase; TIGRFAM: tagatose-6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
  
 0.547
ACL68838.1
PFAM: ROK family.
 
  
0.531
ACL70898.1
PFAM: Phosphomannose isomerase type I; TIGRFAM: mannose-6-phosphate isomerase, class I.
 
  
 0.529
ACL70814.1
ROK family protein; PFAM: Bacterial regulatory proteins, crp family; ROK family; MarR family.
 
  
0.495
ACL71018.1
TIGRFAM: bifunctional phosphoglucose/phosphomannose isomerase.
  
  
 0.494
Your Current Organism:
Halothermothrix orenii
NCBI taxonomy Id: 373903
Other names: H. orenii H 168, Halothermothrix orenii H 168, Halothermothrix orenii str. H 168, Halothermothrix orenii strain H 168
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.