STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL71029.1PFAM: Sulfotransferase domain. (328 aa)    
Predicted Functional Partners:
ACL71030.1
PFAM: MviN-like protein; Polysaccharide biosynthesis protein; MatE.
     
 0.628
ACL71027.1
PFAM: Glycosyl transferases group 1.
  
  
 0.588
ACL71028.1
PFAM: Glycosyl transferases group 1.
  
  
 0.588
ACL71031.1
Mannose-1-phosphate guanylyltransferase (GDP); PFAM: Mannose-6-phosphate isomerase; Nucleotidyl transferase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase.
       0.519
ACL71026.1
Hypothetical protein.
       0.509
ACL71032.1
Hypothetical protein.
       0.497
ACL69221.1
ADP-ribosylation/Crystallin J1; PFAM: ADP-ribosylglycohydrolase.
  
     0.402
Your Current Organism:
Halothermothrix orenii
NCBI taxonomy Id: 373903
Other names: H. orenii H 168, Halothermothrix orenii H 168, Halothermothrix orenii str. H 168, Halothermothrix orenii strain H 168
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.