STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL71076.1Sporulation protease LonC; PFAM: ATPase family associated with various cellular activities (AAA); Magnesium chelatase, subunit ChlI; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: lon-related putative ATP-dependent protease; ATP-dependent protease, Lon family. (639 aa)    
Predicted Functional Partners:
rplI
Ribosomal protein L9; Binds to the 23S rRNA.
      0.831
ACL69375.1
TIGRFAM: stage III sporulation protein AB.
  
    0.717
ACL69379.1
TIGRFAM: stage III sporulation protein AF.
  
     0.617
ACL69312.1
Sporulation protein YtxC; PFAM: YtxC-like family; TIGRFAM: putative sporulation protein YtxC.
  
     0.553
ACL71090.1
Uncharacterized conserved membrane protein.
  
     0.535
ACL70949.1
PFAM: Polysaccharide biosynthesis protein; MviN-like protein; TIGRFAM: stage V sporulation protein B.
  
     0.521
ACL69477.1
TIGRFAM: sporulation protein YtfJ.
  
    0.520
ACL71078.1
Predicted membrane protein.
       0.501
ACL70916.1
PFAM: YabG peptidase U57; TIGRFAM: sporulation peptidase YabG.
  
     0.466
ACL69443.1
PFAM: Integral membrane protein DUF95; TIGRFAM: stage II sporulation protein M.
  
    0.442
Your Current Organism:
Halothermothrix orenii
NCBI taxonomy Id: 373903
Other names: H. orenii H 168, Halothermothrix orenii H 168, Halothermothrix orenii str. H 168, Halothermothrix orenii strain H 168
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.