Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AFY52680.1 | AFY52681.1 | Riv7116_0068 | Riv7116_0069 | PFAM: Transmembrane proteins 14C. | Putative ATPase (AAA+ superfamily); PFAM: Protein of unknown function (DUF815). | 0.633 |
| AFY52681.1 | AFY52680.1 | Riv7116_0069 | Riv7116_0068 | Putative ATPase (AAA+ superfamily); PFAM: Protein of unknown function (DUF815). | PFAM: Transmembrane proteins 14C. | 0.633 |
| AFY52681.1 | AFY52682.1 | Riv7116_0069 | Riv7116_0070 | Putative ATPase (AAA+ superfamily); PFAM: Protein of unknown function (DUF815). | Hypothetical protein. | 0.499 |
| AFY52681.1 | AFY55266.1 | Riv7116_0069 | Riv7116_2767 | Putative ATPase (AAA+ superfamily); PFAM: Protein of unknown function (DUF815). | PFAM: Prephenate dehydrogenase. | 0.462 |
| AFY52681.1 | ilvC | Riv7116_0069 | Riv7116_0299 | Putative ATPase (AAA+ superfamily); PFAM: Protein of unknown function (DUF815). | Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | 0.475 |
| AFY52682.1 | AFY52681.1 | Riv7116_0070 | Riv7116_0069 | Hypothetical protein. | Putative ATPase (AAA+ superfamily); PFAM: Protein of unknown function (DUF815). | 0.499 |
| AFY55266.1 | AFY52681.1 | Riv7116_2767 | Riv7116_0069 | PFAM: Prephenate dehydrogenase. | Putative ATPase (AAA+ superfamily); PFAM: Protein of unknown function (DUF815). | 0.462 |
| ilvC | AFY52681.1 | Riv7116_0299 | Riv7116_0069 | Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | Putative ATPase (AAA+ superfamily); PFAM: Protein of unknown function (DUF815). | 0.475 |