STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY52682.1Hypothetical protein. (425 aa)    
Predicted Functional Partners:
AFY53505.1
Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
 
 
 
 0.819
AFY53938.1
PFAM: Putative peptidoglycan binding domain.
  
     0.773
AFY53706.1
Hypothetical protein.
  
 
   0.761
AFY53532.1
Hypothetical protein.
  
     0.757
AFY54876.1
Hypothetical protein.
  
 
   0.752
AFY53262.1
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
     0.750
AFY54725.1
Putative transcriptional regulator; PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins.
 
 
 0.749
AFY57930.1
Hypothetical protein.
  
     0.745
AFY54868.1
Hypothetical protein.
  
     0.734
AFY55666.1
PFAM: FG-GAP repeat.
  
     0.713
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.