STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY52750.1PFAM: Protein of unknown function (DUF3067). (102 aa)    
Predicted Functional Partners:
AFY55685.1
PFAM: CP12 domain.
  
     0.774
AFY56648.1
PFAM: CP12 domain.
  
     0.774
AFY57684.1
PFAM: Protein of unknown function (DUF3353).
  
     0.774
thf1
Photosystem II biogenesis protein Psp29; May be involved in photosynthetic membrane biogenesis.
  
     0.773
AFY57081.1
PFAM: Protein of unknown function (DUF3007).
  
     0.773
AFY58294.1
PFAM: Protein of unknown function (DUF3119).
  
     0.773
AFY59032.1
Beta-propeller domain-containing protein, methanol dehydrogenase.
  
     0.773
AFY54898.1
PFAM: Protein of unknown function (DUF2930).
  
     0.772
AFY56628.1
Hypothetical protein; PFAM: Chloroplast import component protein (Tic20).
  
     0.771
AFY58185.1
PFAM: Domain of unknown function (DUF1995).
  
     0.771
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.