STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY52910.1PFAM: Protein kinase domain. (477 aa)    
Predicted Functional Partners:
AFY57898.1
PFAM: Protein phosphatase 2C.
  
   0.800
AFY56303.1
PFAM: Protein phosphatase 2C.
  
   0.794
AFY53672.1
PFAM: Protein phosphatase 2C.
  
   0.790
AFY55087.1
PFAM: Protein phosphatase 2C.
  
   0.735
AFY52912.1
PFAM: Protein kinase domain.
 
    
0.461
AFY52911.1
PFAM: Protein kinase domain.
 
    
0.424
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.