Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AFY52786.1 | AFY52951.1 | Riv7116_0178 | Riv7116_0347 | Putative RNA-binding protein; PFAM: R3H domain. | Putative RNA-binding protein (contains KH domain). | 0.966 |
| AFY52786.1 | rpsT | Riv7116_0178 | Riv7116_0717 | Putative RNA-binding protein; PFAM: R3H domain. | SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA. | 0.404 |
| AFY52951.1 | AFY52786.1 | Riv7116_0347 | Riv7116_0178 | Putative RNA-binding protein (contains KH domain). | Putative RNA-binding protein; PFAM: R3H domain. | 0.966 |
| AFY52951.1 | rplS | Riv7116_0347 | Riv7116_0833 | Putative RNA-binding protein (contains KH domain). | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.830 |
| AFY52951.1 | rplT | Riv7116_0347 | Riv7116_5390 | Putative RNA-binding protein (contains KH domain). | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.808 |
| AFY52951.1 | rpmE | Riv7116_0347 | Riv7116_2665 | Putative RNA-binding protein (contains KH domain). | LSU ribosomal protein L31P; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily. | 0.807 |
| AFY52951.1 | rpsD | Riv7116_0347 | Riv7116_3693 | Putative RNA-binding protein (contains KH domain). | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.808 |
| AFY52951.1 | rpsI | Riv7116_0347 | Riv7116_2664 | Putative RNA-binding protein (contains KH domain). | PFAM: Ribosomal protein S9/S16; Belongs to the universal ribosomal protein uS9 family. | 0.826 |
| AFY52951.1 | rpsO | Riv7116_0347 | Riv7116_2773 | Putative RNA-binding protein (contains KH domain). | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.807 |
| AFY52951.1 | rpsP | Riv7116_0347 | Riv7116_0348 | Putative RNA-binding protein (contains KH domain). | PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.988 |
| AFY52951.1 | rpsR | Riv7116_0347 | Riv7116_0016 | Putative RNA-binding protein (contains KH domain). | Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.807 |
| AFY52951.1 | rpsT | Riv7116_0347 | Riv7116_0717 | Putative RNA-binding protein (contains KH domain). | SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA. | 0.807 |
| rplS | AFY52951.1 | Riv7116_0833 | Riv7116_0347 | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | Putative RNA-binding protein (contains KH domain). | 0.830 |
| rplS | rplT | Riv7116_0833 | Riv7116_5390 | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.998 |
| rplS | rpmE | Riv7116_0833 | Riv7116_2665 | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | LSU ribosomal protein L31P; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily. | 0.997 |
| rplS | rpsD | Riv7116_0833 | Riv7116_3693 | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.998 |
| rplS | rpsI | Riv7116_0833 | Riv7116_2664 | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | PFAM: Ribosomal protein S9/S16; Belongs to the universal ribosomal protein uS9 family. | 0.997 |
| rplS | rpsO | Riv7116_0833 | Riv7116_2773 | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.997 |
| rplS | rpsP | Riv7116_0833 | Riv7116_0348 | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.998 |
| rplS | rpsR | Riv7116_0833 | Riv7116_0016 | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.998 |
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