STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY53037.1ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter. (316 aa)    
Predicted Functional Partners:
AFY53903.1
PFAM: ABC transporter; TIGRFAM: ABC exporter ATP-binding subunit, DevA family.
 
    
0.739
AFY58029.1
ABC-type cobalt transport system, ATPase component; PFAM: ABC transporter.
 
    
0.696
AFY57139.1
Hypothetical protein.
  
 
 0.620
AFY59152.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
  
 
 0.620
AFY53038.1
Hypothetical protein.
  
  
 0.565
AFY58341.1
Hypothetical protein.
  
 
 0.545
atpD
ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 
 0.489
AFY53584.1
PFAM: ABC transporter; TIGRFAM: ABC exporter ATP-binding subunit, DevA family.
 
    
0.472
AFY53036.1
Hypothetical protein.
  
  
 0.466
atpA
ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.463
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.