STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY53184.1PFAM: Putative addiction module component; TIGRFAM: putative addiction module component, TIGR02574 family. (74 aa)    
Predicted Functional Partners:
AFY53185.1
PFAM: Plasmid stabilisation system protein.
 
     0.948
AFY53182.1
Hypothetical protein.
       0.658
AFY53183.1
TIGRFAM: clan AA aspartic protease, AF_0612 family.
       0.658
AFY57346.1
Integrase family protein; PFAM: TnsA endonuclease N terminal; Integrase core domain.
  
     0.621
AFY53445.1
Hypothetical protein.
  
     0.559
AFY53181.1
Putative transcription regulator containing HTH domain; Manually curated; non-canonical start codon.
       0.546
AFY55056.1
Hypothetical protein.
  
     0.523
AFY59002.1
Putative glycosyltransferase; PFAM: Glycosyl transferase family 2; Predicted glycosyltransferase involved in capsule biosynthesis.
  
     0.473
AFY57318.1
PFAM: Plasmid recombination enzyme.
  
     0.468
AFY54290.1
Membrane-bound serine protease (ClpP class); PFAM: Plasmid recombination enzyme.
  
     0.457
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.