STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY53296.1Hypothetical protein. (141 aa)    
Predicted Functional Partners:
AFY56230.1
Hypothetical protein.
  
     0.748
AFY55007.1
PFAM: Protein of unknown function (DUF3146).
  
     0.745
AFY54875.1
Hypothetical protein.
  
     0.734
AFY55887.1
Putative low-complexity protein; PFAM: Pentapeptide repeats (8 copies).
  
     0.732
AFY54567.1
Hypothetical protein.
  
     0.724
AFY53511.1
PFAM: Protein of unknown function (DUF3153).
  
     0.723
AFY53173.1
Hypothetical protein.
  
     0.721
AFY58458.1
Hypothetical protein.
  
     0.711
AFY56528.1
Tryptophan-rich sensory protein; PFAM: TspO/MBR family.
  
     0.707
AFY52992.1
Putative bile acid beta-glucosidase; PFAM: beta-Glucocerebrosidase 2 N terminal; Protein of unknown function, DUF608.
  
     0.704
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.