STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY53348.1PFAM: Transmembrane exosortase (Exosortase_EpsH); TIGRFAM: exosortase/archaeosortase family protein; cyanoexosortase B; exosortase. (298 aa)    
Predicted Functional Partners:
atpE
ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
 0.998
AFY56411.1
Putative naringenin-chalcone synthase; PFAM: Chalcone and stilbene synthases, N-terminal domain; Chalcone and stilbene synthases, C-terminal domain.
    
  0.882
AFY53345.1
Uncharacterized protein involved in exopolysaccharide biosynthesis; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family.
 
    0.835
AFY53346.1
PFAM: Polysaccharide biosynthesis/export protein; SLBB domain.
 
     0.813
AFY54924.1
Hypothetical protein.
  
   
 0.777
AFY56709.1
Putative glycosyltransferase; PFAM: Glycosyl transferase family 2.
 
     0.758
AFY56562.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
     0.749
AFY58061.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
     0.748
AFY57714.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
     0.744
AFY57755.1
PFAM: Glycosyl transferase family 2.
 
     0.742
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
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