STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY53599.1PFAM: Orange carotenoid protein, N-terminal; Belongs to the orange carotenoid-binding protein family. (205 aa)    
Predicted Functional Partners:
AFY53600.1
NTF2 domain-containing protein; PFAM: Nuclear transport factor 2 (NTF2) domain.
 
     0.874
AFY56106.1
PFAM: Phycobilisome protein; Phycobilisome Linker polypeptide; Belongs to the phycobilisome linker protein family.
  
 
   0.765
AFY53939.1
Hypothetical protein.
  
     0.735
AFY54484.1
Putative membrane protein; PFAM: Phosphate-starvation-inducible E.
  
     0.699
AFY58632.1
Putative membrane protein; PFAM: Phosphate-starvation-inducible E.
  
     0.699
AFY57472.1
Hypothetical protein.
  
     0.686
AFY54447.1
Organic solvent tolerance protein OstA; PFAM: Protein of unknown function (DUF3769).
  
     0.653
AFY55800.1
Hypothetical protein.
  
     0.651
AFY58389.1
Putative membrane protein; PFAM: Phosphate-starvation-inducible E.
  
     0.648
AFY56012.1
PFAM: PBS lyase HEAT-like repeat.
  
     0.647
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
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