STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY53682.1Metal-dependent hydrolase, beta-lactamase superfamily I. (300 aa)    
Predicted Functional Partners:
panD
L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
       0.786
AFY56229.1
PAS domain S-box; PFAM: Adenylate and Guanylate cyclase catalytic domain; GAF domain; PAS fold; TIGRFAM: PAS domain S-box.
 
  
 0.753
AFY55118.1
PFAM: Adenylate and Guanylate cyclase catalytic domain; GAF domain.
 
     0.668
AFY58507.1
Putative transmembrane sensor domain protein; PFAM: Adenylate and Guanylate cyclase catalytic domain; CHASE2 domain.
 
     0.651
AFY58602.1
Putative transmembrane sensor domain protein; PFAM: Adenylate and Guanylate cyclase catalytic domain; CHASE2 domain.
 
     0.638
AFY56494.1
PFAM: Adenylate and Guanylate cyclase catalytic domain; GAF domain; FHA domain.
 
     0.561
ppa
Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
     
 0.547
AFY57946.1
cAMP-binding protein; PFAM: Cyclic nucleotide-binding domain.
  
     0.471
AFY55882.1
PFAM: Amidohydrolase family; TIGRFAM: phosphonate metabolism protein PhnM.
  
  
 0.436
AFY58686.1
PFAM: Coenzyme PQQ synthesis protein D (PqqD); TIGRFAM: coenzyme PQQ biosynthesis protein PqqD.
  
  
 0.433
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
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