STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY53740.1PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain. (436 aa)    
Predicted Functional Partners:
AFY53739.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
  0.991
AFY58938.1
PFAM: Response regulator receiver domain.
  
  0.979
AFY54443.1
PFAM: Response regulator receiver domain.
 
 
 0.859
AFY53741.1
Phosphate uptake regulator, PhoU; Plays a role in the regulation of phosphate uptake.
 
   
 0.849
AFY53363.1
PFAM: Response regulator receiver domain.
 
   0.799
AFY54980.1
PFAM: Response regulator receiver domain.
  
   0.798
AFY59097.1
PFAM: Response regulator receiver domain.
  
   0.797
AFY54012.1
PFAM: Response regulator receiver domain.
  
   0.788
AFY57042.1
PFAM: Response regulator receiver domain.
  
   0.785
AFY53191.1
PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
 
   0.776
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
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