STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY53898.1Hypothetical protein. (354 aa)    
Predicted Functional Partners:
AFY53896.1
Putative PLP-dependent enzyme possibly involved in cell wall biogenesis; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.
       0.776
AFY53897.1
PFAM: Glycosyl transferase family 2.
       0.773
AFY52853.1
Hypothetical protein.
 
     0.733
AFY54697.1
Membrane protein involved in the export of O-antigen and teichoic acid; PFAM: Polysaccharide biosynthesis protein.
 
     0.628
AFY54599.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: Bacterial extracellular solute-binding protein.
  
     0.557
AFY52852.1
Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin; PFAM: Phytanoyl-CoA dioxygenase (PhyH).
  
     0.528
AFY53692.1
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase; PFAM: FAD binding domain.
  
     0.495
AFY53701.1
Rieske (2Fe-2S) domain-containing protein; PFAM: Rieske [2Fe-2S] domain.
  
     0.482
AFY52775.1
NB-ARC domain-containing protein; PFAM: NB-ARC domain.
  
     0.475
AFY55492.1
Hypothetical protein.
  
     0.453
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.