STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY54578.1Putative N-acetylglucosaminyltransferase; PFAM: Core-2/I-Branching enzyme. (340 aa)    
Predicted Functional Partners:
AFY56042.1
Conserved repeat protein; PFAM: Domain of unknown function DUF11; TIGRFAM: conserved repeat domain.
  
     0.735
AFY54585.1
PFAM: O-Antigen ligase.
  
    0.733
AFY54577.1
PFAM: Glycosyl transferase family 2.
       0.668
AFY53490.1
Histidine kinase with GAF domain; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; His Kinase A (phosphoacceptor) domain.
  
    0.628
AFY57997.1
Hypothetical protein.
  
     0.622
AFY56046.1
Conserved repeat protein; PFAM: Domain of unknown function DUF11; TIGRFAM: conserved repeat domain.
  
     0.615
AFY57083.1
Hypothetical protein.
  
    0.609
AFY54579.1
PFAM: Glycosyl transferase WecB/TagA/CpsF family; TIGRFAM: bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family; Belongs to the glycosyltransferase 26 family.
       0.608
AFY52768.1
HEAT repeat-containing protein; PFAM: Adaptin N terminal region; HEAT repeat.
  
     0.596
AFY53781.1
Hypothetical protein.
  
     0.583
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
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