STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY55196.1Esterase/lipase. (337 aa)    
Predicted Functional Partners:
AFY56047.1
TIGRFAM: conserved repeat domain.
  
     0.702
AFY59175.1
Thiosulfate reductase cytochrome B subunit (membrane anchoring protein); PFAM: Cytochrome b(N-terminal)/b6/petB.
  
     0.675
AFY56045.1
Hypothetical protein.
  
     0.639
AFY56046.1
Conserved repeat protein; PFAM: Domain of unknown function DUF11; TIGRFAM: conserved repeat domain.
  
     0.613
AFY57318.1
PFAM: Plasmid recombination enzyme.
  
     0.600
AFY54290.1
Membrane-bound serine protease (ClpP class); PFAM: Plasmid recombination enzyme.
  
     0.576
AFY59121.1
Putative membrane protein.
  
     0.535
AFY52935.1
PFAM: Predicted periplasmic protein (DUF2233).
  
     0.517
AFY56798.1
EAL domain-containing protein; PFAM: Caspase domain; EAL domain.
  
     0.498
AFY58316.1
PFAM: GH3 auxin-responsive promoter.
  
     0.498
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.