STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY55303.1Putative peptidoglycan-binding domain-containing protein; PFAM: Putative peptidoglycan binding domain. (543 aa)    
Predicted Functional Partners:
AFY52880.1
Putative peptidoglycan-binding domain-containing protein; PFAM: Putative peptidoglycan binding domain.
  
     0.774
AFY56066.1
Putative peptidoglycan-binding domain-containing protein; PFAM: Putative peptidoglycan binding domain.
  
     0.768
AFY57029.1
Putative peptidoglycan-binding domain-containing protein; PFAM: Putative peptidoglycan binding domain; L,D-transpeptidase catalytic domain.
  
     0.768
AFY55974.1
Putative peptidoglycan-binding domain-containing protein; PFAM: Putative peptidoglycan binding domain.
  
     0.764
AFY53004.1
Putative peptidoglycan-binding domain-containing protein; PFAM: Putative peptidoglycan binding domain.
  
     0.763
AFY56409.1
Putative peptidoglycan-binding domain-containing protein; PFAM: Putative peptidoglycan binding domain.
  
     0.763
AFY55973.1
Putative peptidoglycan-binding domain-containing protein; PFAM: Putative peptidoglycan binding domain.
  
     0.740
AFY57231.1
Putative peptidoglycan-binding domain-containing protein; PFAM: Putative peptidoglycan binding domain.
  
     0.737
AFY56902.1
Putative peptidoglycan-binding domain-containing protein; PFAM: Putative peptidoglycan binding domain.
  
     0.722
AFY58969.1
Putative peptidoglycan-binding domain-containing protein; PFAM: Putative peptidoglycan binding domain.
  
     0.503
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.