STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY55492.1Hypothetical protein. (485 aa)    
Predicted Functional Partners:
AFY53113.1
PFAM: Acetyltransferase (GNAT) family.
  
     0.629
AFY57335.1
Putative NTPase (NACHT family); PFAM: NACHT domain.
  
     0.617
AFY58022.1
PFAM: Protein of unknown function (DUF1822).
  
     0.585
AFY55429.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
     0.573
AFY56154.1
PFAM: Protein of unknown function (DUF1822).
  
     0.573
AFY56188.1
Hypothetical protein.
  
     0.554
AFY52853.1
Hypothetical protein.
  
     0.547
AFY56189.1
Hypothetical protein.
  
     0.538
AFY54623.1
PFAM: Radical SAM superfamily.
 
     0.530
AFY55600.1
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Bacterial regulatory proteins, luxR family.
  
     0.516
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.