STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY55989.1Hypothetical protein. (69 aa)    
Predicted Functional Partners:
AFY57155.1
Hypothetical protein.
  
     0.768
AFY55075.1
PFAM: Protein of unknown function (DUF2993).
  
     0.766
AFY59202.1
Hypothetical protein.
  
     0.766
AFY52824.1
Hypothetical protein.
  
     0.765
AFY55657.1
Hypothetical protein.
  
     0.759
AFY57094.1
Hypothetical protein.
  
     0.759
AFY53373.1
Hypothetical protein.
  
     0.756
AFY57154.1
Protoheme ferro-lyase (ferrochelatase); PFAM: Ferrochelatase; Belongs to the ferrochelatase family.
  
     0.753
AFY56058.1
Hypothetical protein.
  
     0.752
AFY55302.1
Hypothetical protein.
  
     0.748
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.