STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY56072.1Heterodisulfide reductase, subunit B; PFAM: Cysteine-rich domain. (296 aa)    
Predicted Functional Partners:
AFY53021.1
TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
 
 
 0.985
AFY53852.1
PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup.
 
 
 0.968
AFY53039.1
PFAM: CoA binding domain; TIGRFAM: succinyl-CoA synthetase, alpha subunit.
  
  
 0.920
AFY53040.1
PFAM: ATP-grasp domain; TIGRFAM: succinyl-CoA synthetase, beta subunit.
  
  
  0.917
AFY56492.1
PFAM: Aldehyde dehydrogenase family.
   
 
  0.900
AFY58550.1
Ni,Fe-hydrogenase I large subunit; PFAM: Nickel-dependent hydrogenase.
  
 
 0.871
argH
PFAM: Lyase; TIGRFAM: argininosuccinate lyase.
     
  0.800
AFY56815.1
PFAM: Aminotransferase class I and II.
   
 
  0.800
AFY55851.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
  
 
 0.720
AFY53642.1
PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II.
   
 
 0.662
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
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