STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY56185.1Putative glycosyltransferase; PFAM: Glycosyl transferase family 2. (364 aa)    
Predicted Functional Partners:
AFY56186.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
 
    0.801
AFY56184.1
ABC-type polysaccharide/polyol phosphate export systems, permease component; PFAM: ABC-2 type transporter.
 
    0.723
AFY56183.1
ABC-type polysaccharide/polyol phosphate transport system, ATPase component; PFAM: ABC transporter.
 
    0.630
AFY58044.1
Lipid A core-O-antigen ligase-like enyme; PFAM: O-Antigen ligase.
  
    0.575
AFY52820.1
PEP-CTERM putative exosortase interaction domain-containing protein; PFAM: GDSL-like Lipase/Acylhydrolase; TIGRFAM: PEP-CTERM protein sorting domain.
  
     0.523
AFY55336.1
PFAM: Protein of unknown function (DUF1822).
  
     0.523
AFY59119.1
PFAM: Protein of unknown function (DUF1822).
  
     0.494
AFY58580.1
PFAM: Domain of Unknown Function (DUF928).
  
     0.488
AFY54984.1
PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
  
     0.475
AFY55428.1
PFAM: Glycosyltransferase family 28 C-terminal domain.
 
     0.464
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.