STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY56209.1Hypothetical protein. (125 aa)    
Predicted Functional Partners:
AFY55115.1
Hypothetical protein.
  
     0.775
AFY53280.1
TIGR02652 family protein; PFAM: Protein of unknown function (DUF2396); TIGRFAM: TIGR02652 family protein.
  
     0.773
AFY53491.1
PFAM: Mo-dependent nitrogenase C-terminus.
  
     0.771
AFY54506.1
PFAM: Mo-dependent nitrogenase C-terminus.
  
     0.770
AFY55290.1
Serine acetyltransferase.
  
     0.769
AFY57092.1
PFAM: Protein of unknown function (DUF751).
  
     0.768
AFY53917.1
PFAM: Domain of unknown function (DUF1830).
  
     0.766
AFY55536.1
PFAM: Mo-dependent nitrogenase C-terminus.
  
     0.765
AFY55058.1
PFAM: Protein of unknown function (DUF1232).
  
     0.764
AFY56584.1
PFAM: Protein of unknown function (DUF3285).
  
     0.764
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.