STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY56241.1Putative metal-binding protein; PFAM: Protein of unknown function (DUF1636). (134 aa)    
Predicted Functional Partners:
cbiD
Cobalamin biosynthesis protein CbiD; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
       0.773
AFY56449.1
Hypothetical protein.
  
     0.539
AFY57034.1
Hypothetical protein; PFAM: Domain of Unknown Function (DUF748); Family of unknown function (DUF490).
  
     0.474
AFY54547.1
Hypothetical protein.
  
     0.471
AFY57752.1
Hypothetical protein.
  
     0.464
AFY54911.1
DGQHR domain-containing protein; TIGRFAM: DGQHR domain.
  
     0.463
AFY56246.1
PFAM: Precorrin-6x reductase CbiJ/CobK; TIGRFAM: precorrin-6x reductase.
 
     0.440
AFY55133.1
FHA domain-containing protein; PFAM: FHA domain.
  
     0.437
AFY55577.1
P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein; PFAM: LTXXQ motif.
  
     0.418
AFY57061.1
PFAM: Dynamin family.
  
     0.417
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
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