STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY56299.1Glycosyltransferase; PFAM: Glycosyl transferases group 1. (1235 aa)    
Predicted Functional Partners:
AFY56300.1
PFAM: Protein of unknown function (DUF2633).
       0.662
AFY57856.1
Hypothetical protein.
 
    0.661
AFY53718.1
Collagenase-like protease; PFAM: Collagenase; Peptidase family U32.
  
  
 0.656
AFY52755.1
PFAM: KAP family P-loop domain.
  
     0.654
AFY53540.1
PFAM: KAP family P-loop domain.
  
     0.653
AFY58098.1
Putative phosphohydrolase; PFAM: Calcineurin-like phosphoesterase.
  
     0.618
AFY58601.1
PFAM: haemagglutination activity domain; TIGRFAM: filamentous hemagglutinin family N-terminal domain.
  
    0.616
AFY54545.1
PFAM: Calcineurin-like phosphoesterase.
  
     0.599
AFY54911.1
DGQHR domain-containing protein; TIGRFAM: DGQHR domain.
  
     0.597
AFY55802.1
Putative NTPase (NACHT family); PFAM: Tetratricopeptide repeat; NACHT domain.
  
 
   0.551
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.