STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY56689.1Hypothetical protein. (818 aa)    
Predicted Functional Partners:
AFY54094.1
Putative deacylase; PFAM: Succinylglutamate desuccinylase / Aspartoacylase family.
  
   
 0.695
AFY58804.1
PFAM: Protein of unknown function (DUF2993).
  
     0.643
AFY57252.1
Hypothetical protein.
  
     0.621
AFY56495.1
PFAM: VanZ like family.
  
     0.587
AFY56665.1
Putative glycosyltransferase; PFAM: Glycosyl transferase family 2.
  
     0.584
AFY59021.1
PFAM: Predicted membrane protein (DUF2079).
  
     0.548
AFY58227.1
Putative membrane protein; PFAM: Bacterial low temperature requirement A protein (LtrA).
  
     0.492
AFY57432.1
HIRAN domain-containing protein; PFAM: HIRAN domain.
  
     0.466
AFY53176.1
Hypothetical protein.
 
     0.463
AFY58419.1
Exosortase, cyanobacterial variant; PFAM: Transmembrane exosortase (Exosortase_EpsH); TIGRFAM: cyanoexosortase A; exosortase/archaeosortase family protein; exosortase.
  
     0.463
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.