STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY56767.1ATPase involved in chromosome partitioning; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain. (196 aa)    
Predicted Functional Partners:
AFY54725.1
Putative transcriptional regulator; PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins.
 
 
 0.858
AFY56768.1
Hypothetical protein.
       0.773
AFY55674.1
Hypothetical protein.
  
 
   0.646
AFY57653.1
PFAM: Protein of unknown function (DUF3137).
  
     0.586
AFY54505.1
Putative protease of the Abi (CAAX) family; PFAM: CAAX amino terminal protease family.
  
     0.487
AFY53899.1
Kef-type K+ ransport system, predicted NAD-binding component; PFAM: Cation transport protein; TrkA-N domain.
  
     0.486
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
  
 0.473
AFY57729.1
Hypothetical protein; PFAM: Domain of Unknown Function (DUF748); Family of unknown function (DUF490).
 
     0.448
AFY56995.1
SnoaL-like polyketide cyclase.
  
     0.411
AFY58063.1
CHRD domain-containing protein; PFAM: CHRD domain; Spondin_N.
  
   
 0.408
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
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