STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY56847.1Hypothetical protein. (357 aa)    
Predicted Functional Partners:
AFY58568.1
Site-specific recombinase, DNA invertase Pin; PFAM: Recombinase; Resolvase, N terminal domain.
  
    0.714
AFY52853.1
Hypothetical protein.
  
     0.684
AFY58547.1
Site-specific recombinase, DNA invertase Pin; PFAM: Recombinase; Resolvase, N terminal domain.
  
    0.661
AFY56392.1
PFAM: Protein of unknown function (DUF2993).
  
     0.632
AFY55530.1
PFAM: Domain of Unknown Function (DUF928).
  
     0.617
AFY56150.1
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
  
     0.550
AFY55600.1
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Bacterial regulatory proteins, luxR family.
  
     0.540
AFY52667.1
PFAM: Putative integral membrane protein (DUF2391); TIGRFAM: putative integral membrane protein TIGR02587.
  
     0.534
AFY52666.1
TIGR02588 family protein; PFAM: Protein of unknown function (DUF2393); TIGRFAM: TIGR02588 family protein.
  
     0.531
AFY57335.1
Putative NTPase (NACHT family); PFAM: NACHT domain.
  
     0.531
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.