STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY56915.1ABC-type phosphate/phosphonate transport system, periplasmic component. (284 aa)    
Predicted Functional Partners:
AFY56916.1
PFAM: HAMP domain; Protein of unknown function (DUF3365).
 
     0.889
AFY56917.1
PFAM: HAMP domain; Protein of unknown function (DUF3365).
 
     0.847
AFY53934.1
Signal transduction histidine kinase, nitrate/nitrite-specific; PFAM: HAMP domain; Protein of unknown function (DUF3365).
 
     0.772
AFY56081.1
PFAM: Bacterial regulatory proteins, tetR family; Phage integrase family.
  
     0.753
phnC
Phosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
  
  
 0.747
AFY56697.1
Hypothetical protein.
  
     0.670
AFY55978.1
Hypothetical protein.
  
     0.660
AFY57183.1
NB-ARC domain-containing protein; PFAM: NB-ARC domain.
  
    0.593
AFY54004.1
Putative RNA-binding protein containing Zn ribbon; PFAM: Protein of unknown function (DUF721).
  
     0.592
AFY56051.1
Putative S-layer protein; PFAM: Carbohydrate-selective porin, OprB family; S-layer homology domain; Belongs to the OprB family.
  
     0.592
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.