STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY57141.1Putative S-layer protein; PFAM: Protein of unknown function (DUF1565); S-layer homology domain; TIGRFAM: parallel beta-helix repeat (two copies). (697 aa)    
Predicted Functional Partners:
AFY54031.1
PFAM: Proprotein convertase P-domain; Subtilase family.
 
 
   0.790
AFY53369.1
N-acetylmuramoyl-L-alanine amidase; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; N-acetylmuramoyl-L-alanine amidase.
  
     0.734
AFY53152.1
Hypothetical protein.
  
     0.732
AFY53799.1
Hypothetical protein.
  
     0.731
AFY56326.1
Hypothetical protein.
  
     0.721
AFY53814.1
Hypothetical protein.
  
     0.692
AFY53621.1
Hypothetical protein.
  
     0.691
AFY53676.1
Putative membrane protein; PFAM: FHA domain.
  
     0.681
AFY53953.1
RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4.
  
 
   0.669
AFY54876.1
Hypothetical protein.
  
     0.648
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.