STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY57172.1Glycosyltransferase; PFAM: Glycosyl transferases group 1. (368 aa)    
Predicted Functional Partners:
AFY53835.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
     0.706
AFY57173.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
 
    
0.681
AFY58041.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
     0.593
AFY57171.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
 
     0.586
AFY57235.1
PFAM: Glycosyl transferases group 1; TIGRFAM: N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA.
  
     0.582
AFY53079.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
     0.571
AFY55938.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
     0.552
AFY55937.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
     0.535
AFY54694.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
     0.513
AFY55073.1
Nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase.
  
    0.454
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.